Sage Workflows User Guide

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Overview

Rationale
Workflows 101
Workflow Standards
Workflow Engines

CWL Usage

Getting Started with CWL
CWL Inputs & Outputs
Using Containers

CWL Examples

JavaScript & CWL
Scattering Inputs
Staging Folders

Workflow Infrastructure

Cloud Providers

Sharing & Discovery

Sharing Workflows
Workflow Metadata
CWL & Linked Data

Synapse & Workflows

Synapse CWL Tools
Synapse Workflow Hook

Sage Workflows User Guide

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