Sage Workflows User Guide
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Overview

  • Rationale
  • Workflows 101
  • Workflow Standards
  • Workflow Engines

CWL Usage

  • Getting Started with CWL
  • CWL Inputs & Outputs
  • Using Containers

CWL Examples

  • JavaScript & CWL
  • Scattering Inputs
  • Staging Folders

Workflow Infrastructure

  • Cloud Providers

Sharing & Discovery

  • Sharing Workflows
  • Workflow Metadata
  • CWL & Linked Data

Synapse & Workflows

  • Synapse CWL Tools
  • Synapse Workflow Hook
Sage Workflows User Guide
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